General Information
Overview
Data ID:
SAID050
GSE:
GSE153596
GSM:
GSM4647788
Species:
Mouse
Condition:
Healthy
Disease:
unwounded
Tissue:
dorsal skin
Position:
not mentioned
Cells:
2626
Age:
P21
Sex:
Both
Characteristics
tissue: dorsal skin genotype: WT strain: C57BL/6 condition: unwounded
Experiment Information
Title:
Single Cell RNA Sequencing of neonatal and juvenile mice skin (wound and unwounded)
Summary:
We perform 10X Genomics scRNA-Seq on P2, P21, P2 + 7 days post wound, P21 + 7 days post wound, with 3 bioreplicates for each condition. Fastq files and output folders were generated from Cellranger pipeline. Loom files were generated using Velocyto.py for downstream analysis. Chemistry: V2
Overall Design:
scRNA-Seq on P2, P21, P2 7 days post wound, P21 7 days post wound, with 3 bioreplicates for each condition
Cell Clustering
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Enrichment Analysis
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Differentially Expressed Genes
p-value threshold 0.05
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Log fold change 1.0
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Dynamic Analysis

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