General Information
Overview
Data ID:
SAID206
GSE:
HRA000166
GSM:
HRR060140
Species:
Human
Condition:
lymphoma
Disease:
Tissue:
Subcutaneous Tissue
Position:
not mentioned
Cells:
1702
Age:
48
Sex:
female
Characteristics
tissue: skin cell line: YUMM3.3 cell type: mouse melanoma cell line treatment: ActA time: 4H
Experiment Information
Title:
Inhibition of anti-tumor immunity by melanoma cell-derived Activin-A depends on STING (RNA-Seq)
Summary:
The transforming growth factor-β (TGF-ꞵ) family member activin A (hereafter Activin-A) is overexpressed in many cancer types, often correlating with cancer-associated cachexia and poor prognosis. Activin-A secretion by melanoma cells indirectly impedes CD8+ T cell-mediated anti-tumor immunity and promotes resistance to immunotherapies, even though Activin-A can be proinflammatory in other contexts. To identify underlying mechanisms, we here analyzed the effect of Activin-A on syngeneic grafts of Braf mutant YUMM3.3 mouse melanoma cells and on their microenvironment using single-cell RNA sequencing. We found that the Activin-A-induced immune evasion was accompanied by a proinflammatory interferon signature across multiple cell types, and that the associated increase in tumor growth depended at least in part on pernicious STING activity within the melanoma cells. Besides corroborating a role for proinflammatory signals in facilitating immune evasion, our results suggest that STING holds considerable potential as a therapeutic target to mitigate tumor-promoting Activin-A signaling at least in melanoma.
Overall Design:
To assess how crosstalk of Activin-A with IFN-γ influences gene expression in the absence of the TME, mRNA from YUMM3.3 cells that were treated in quadriplicates with IFN-γ and Activin-A individually or together for 4 or 12 hrs was analyzed by Bulk RNA Barcoding and Sequencing (BRB-seq)
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